Distribution and dietary regulation of an associated facultative Rhizobiales-related bacterium in the omnivorous giant tropical ant,Paraponera clavata

We document a facultative Bartonella-like Rhizobiales bacterium in the giant tropical ant, Paraponera clavata. In a lowland tropical rainforest in Costa Rica, 59 colonies were assayed for the prevalence of the Bartonella-like bacterium (BLB), 14 of which were positive. We addressed three questions: First, how does the prevalence of BLB within colonies vary with environmental conditions? Second, how does diet affect the prevalence of BLB in P. clavata? Third, how does the distribution of BLB among colonies reflect ambient differences in food resources and foraging habits? A variety of environmental variables that may be predictive of the presence of BLB were measured, and diet manipulations were conducted to test whether the prevalence of BLB responded to supplemental carbohydrate or prey. The ambient frequency of BLB is much higher in young secondary forests, but is nearly absent from older secondary forests. The prevalence of BLB inside field colonies increased over the duration of a 2-week carbohydrate supplementation; however, water and prey supplementation did not alter the prevalence of BLB. The diets of the colonies located in young secondary forest, compared to other habitats, have a diet richer in carbohydrates and lower in prey. The abundance of carbohydrate, or the relative lack of N, in a colony’s diet influences the occurrence of the BLB microbe in P. clavata. As experimental diet manipulations can affect the facultative presence of an N-cycling microbe, a consistent diet shift in diet may facilitate the emergence of tighter symbioses.     

Local Perception of Environmental Change in a Semi-Arid Area of Northeast Brazil: A New Approach for the Use of Participatory Methods at the Level of Family Units

The diversity of plant resources in the Brazilian semi-arid region is being compromised by practices related to agriculture, pastures, and forest harvesting, especially in areas containing Caatinga vegetation (xeric shrublands and thorn forests). The impact of these practices constitutes a series of complex factors involving local issues, creating a need for further scientific studies on the social-environmental dynamics of natural resource use. Through participatory methods, the present study analyzed people’s representations about local environmental change processes in the Brazilian semi-arid region, taking into consideration local production systems, natural resources, and their importance. Environmental historical graphs were developed with nine local families to analyze landscape changes with regard to cultivated areas and pastures, and their relationship with the availability of native vegetation. Punctuation exercises were performed to observe the importance of each unit that supplied native and cultivated resources. The availability of native resources in the environment is subject to stability, as observed by a majority of the local families. The role of the production units (crops and pastures) was emphasized by most families in the study, especially because of the need for products for subsistence needs and income generation. The current decline of such practices is a consequence of an exodus of field workers and also relates to the conservation of native species that otherwise would have been deforested in favor of agricultural practices.     

Annual migrations,diving behavior,and thermal biology of Atlantic bluefin tuna, <Emphasis Type="Italic">Thunnus thynnus</Emphasis>, on their Gulf of Mexico breeding grounds

Electronic tags were used to examine the biology of Atlantic bluefin tuna (Thunnus thynnus L.) on their breeding grounds in the Gulf of Mexico (GOM). The hypothesis that movement patterns, diving behavior, and thermal biology change during different stages of the breeding migration was tested. Mature Atlantic bluefin tuna tagged in the western Atlantic and the GOM, were on their breeding grounds from February to June for an average of 39 ± 11 days. The bluefin tuna experienced significantly warmer mean sea surface temperatures (SSTs) within the GOM (26.4 ± 1.6°C) than outside the GOM (20.2 ± 1.9°C). As the bluefin tuna entered and exited the GOM, the fish dove to daily maximum depths of 568 ± 50 and 580 ± 144 m, respectively, and exhibited directed movement paths to and from the localized breeding areas. During the putative breeding phase, the bluefin tuna had significantly shallower daily maximum depths (203 ± 76 m), and exhibited shallow oscillatory dives during the night. The movement paths of the bluefin tuna during the breeding phase were significantly more residential and sinuous. The heat transfer coefficients (K) were calculated for a bluefin tuna in the GOM using the recorded ambient and body temperatures. The K for this fish increased rapidly at the high ambient temperatures encountered in the GOM, and was significantly higher at night in the breeding phase when the fish was exhibiting shallow oscillatory dives. This suggests that the fish were behaviorally and physiologically thermoregulating in the Gulf of Mexico. This study demonstrates that the movement patterns, diving behavior, and thermal biology of Atlantic bluefin tuna change significantly at different stages of the breeding migration and can be used to define spawning location and timing. Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible for authorized users.     

Transient population dynamics in periodic matrix models: methodology and effects of cyclic permutations

Many biological populations are subject to periodically changing environments such as years with or without fire, or rotation of crop types. The dynamics and management options for such populations are frequently investigated using periodic matrix models. However the analysis is usually limited to long-term results (asymptotic population growth rate and its sensitivity to perturbations of vital rates). In non-periodic matrix models it has been shown that long-term results may be misleading as populations are rarely in their stable structure. We therefore develop methods to analyze transient dynamics of periodic matrix models. In particular, we show how to calculate the effects of perturbations on population size within and at the end of environmental cycles. Using a model of a weed population subject to a crop rotation, we show that different cyclic permutations produce different patterns of sensitivity of population size and different population sizes. By examining how the starting environment interacts with the initial conditions, we explain how different patterns arise. Such understanding is critical to developing effective management and monitoring strategies for populations subject to periodically recurring environments.     

Influence of soil type and extraction conditions on perchlorate analysis by ion chromatography

Perchlorate is a stable anion that has been introduced into the environment through activities related to its production and use as a solid rocket propellant. Perchlorate is thought to transport through soils without being adsorbed; thus, for determination of perchlorate in soil, samples are typically extracted with water prior to analysis. The completeness of extraction depends on perchlorate existing as a free ion within the soil matrix. In this study, perchlorate extraction efficiency was evaluated with five soil types under two different oxygen states. For each soil, 30% (w/w) slurries were prepared and equilibrated under either oxic or anoxic conditions prior to spiking with a stock solution of sodium perchlorate, and the slurries were then maintained for 1-week or 1-month. At the end of the exposure, slurries were centrifuged and separated into aqueous and soil phases. After phase separation, the soil was washed first with deionized water and then with 50mM NaOH, producing second and third aqueous phases, respectively. Perchlorate concentrations in the three aqueous phases were determined using ion chromatography. The results obtained from this study suggest that matrix interference and signal suppression due to high conductivity have greater effects upon observed perchlorate concentrations by ion chromatography than does perchlorate interaction with soil. Thus, a single water extraction is sufficient for quantitative determination of perchlorate in soil.     

Rapid ethnobotanical diagnosis of the Fulni-? Indigenous lands (NE Brazil): floristic survey and local conservation priorities for medicinal plants

This study was developed as part of the project ??Studies for Environmental and Cultural Sustainability of the Fulni-ô Medical System: Office on handling medicinal plants??. The Fulni-ô people are located in Pernambuco State, Northeastern Brazil. One of the components of this project was an ethnobotanical diagnosis of the indigenous land, where a phytosociological survey was performed in an area of Caatinga vegetation, located at Ouricuri settlement. Based on these ethnobotanical data, we calculated a conservation priority index aiming to rank species that should receive immediate attention from the Fulni-ô people. We identified 44 woody plants, 50% of which have a medicinal use. Among these, six plants were considered highly vulnerable and in need of immediate conservationist attention, in order to ensure the perpetuation of these species and the sustainability of traditional therapeutic practices of the Fulni-ô: Anadenanthera colubrina, Myracrodruon urundeuva, Lippia sp., Spondias tuberosa, Maytenus rigida, and Sideroxylon obtusifolium. We recommend the direct involvement of the Fulni-ô people in the conservation and the management of local resources by implementing a management plan and monitoring strategies for the populations of plants considered most important by the indigenous group.     

Species, functional groups, and thresholds in ecological resilience

The cross-scale resilience model states that ecological resilience is generated in part from the distribution of functions within and across scales in a system. Resilience is a measure of a system's ability to remain organized around a particular set of mutually reinforcing processes and structures, known as a regime. We define scale as the geographic extent over which a process operates and the frequency with which a process occurs. Species can be categorized into functional groups that are a link between ecosystem processes and structures and ecological resilience. We applied the cross-scale resilience model to avian species in a grassland ecosystem. A species' morphology is shaped in part by its interaction with ecological structure and pattern, so animal body mass reflects the spatial and temporal distribution of resources. We used the log-transformed rank-ordered body masses of breeding birds associated with grasslands to identify aggregations and discontinuities in the distribution of those body masses. We assessed cross-scale resilience on the basis of 3 metrics: overall number of functional groups, number of functional groups within an aggregation, and the redundancy of functional groups across aggregations. We assessed how the loss of threatened species would affect cross-scale resilience by removing threatened species from the data set and recalculating values of the 3 metrics. We also determined whether more function was retained than expected after the loss of threatened species by comparing observed loss with simulated random loss in a Monte Carlo process. The observed distribution of function compared with the random simulated loss of function indicated that more functionality in the observed data set was retained than expected. On the basis of our results, we believe an ecosystem with a full complement of species can sustain considerable species losses without affecting the distribution of functions within and across aggregations, although ecological resilience is reduced. We propose that the mechanisms responsible for shaping discontinuous distributions of body mass and the nonrandom distribution of functions may also shape species losses such that local extinctions will be nonrandom with respect to the retention and distribution of functions and that the distribution of function within and across aggregations will be conserved despite extinctions.     

Modified Whittaker plots as an assessment and monitoring tool for vegetation in a lowland tropical rainforest

Resource exploitation in lowland tropical forests is increasingand causing loss of biodiversity. Effective evaluation and management of the impacts of development on tropical forests requires appropriate assessment and monitoring tools. We proposethe use of 0.1-ha multi-scale, modified Whittaker plots (MWPs) to assess and monitor vegetation in lowland tropical rainforests.We established MWPs at 4 sites to: (1) describe and comparecomposition and structure of the sites using MWPs, (2) compare these results to those of 1-ha permanent vegetation plots (BDPs),and (3) evaluate the ability of MWPs to detect changes in populations (statistical power). We recorded more than 400 species at each site. Species composition among the sites was distinctive, while mean abundance and basal area was similar. Comparisons between MWPs and BDPs show that they record similarspecies composition and abundance and that both perform equallywell at detecting rare species. However, MWPs tend to record morespecies, and power analysis studies show that MWPs were more effective at detecting changes in the mean number of species of trees 10 cm in diameter at breast height (dbh) and in herbaceous plants. Ten MWPs were sufficient to detect a change of 11% in the mean number of herb species, and they were able to detect a 14% change in the mean number of species of trees 10 cm dbh. The value of MWPs for assessment and monitoringis discussed, along with recommendations for improving the sampling design to increase power.     

Spawning and development in <Emphasis Type="Italic">Osedax</Emphasis> boneworms (Siboglinidae,Annelida)

We report observations on spawning and early development in bone-eating worms of the genus Osedax. Individual females of Osedax rubiplumus were observed at 1820 m depth freely spawning hundreds of oocytes, and females of an undescribed species, Osedax “orange collar”, were observed spawning in laboratory aquaria. Cytological and molecular analysis of the spawned oocytes of two Osedax species revealed no evidence for the bacterial endosymbionts that the female worms require for their nutrition, suggesting that the bacteria must be acquired later from the environment, as they are in other siboglinids. Individual O. “orange collar” females released an average of 335 (±130) eggs per day, but the number of oocytes spawned per day varied greatly, suggesting that not all the females spawned daily. Fertilization rates of the spawned oocytes varied from 0 to 100%, though most females showed nearly 100% fertilization rates. Oocytes spawned in the laboratory at 4–6°C were negatively buoyant. If fertilized, these oocytes extruded polar bodies and then after at least four hours cleaved unequally. Subsequent cleavages occurred in a spiral pattern at roughly 2-h intervals, resulting in free-swimming trochophore larvae after 24 h. These lecithotrophic trochophores swam for 9–16 days before settling with several hooked chaetae, similar to those of dwarf Osedax males. The larval life span of the Osedax species studied in the laboratory appears to be shorter than in closely related Vestimentifera. Osedax rubiplumus, on the other hand, has much larger oocytes and so may have greater dispersal potential than these other Osedax species. The high fecundity and apparently continuous reproduction of Osedax boneworms permits the opportunistic exploitation of sunken vertebrate bones. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.